Introduction

Highly comparative time-series analysis using hcts

GitHub: hctsa

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Introduction

List of included code files

Example analysis pipelines

Advice and common pitfalls

Installing and setting up

Running hctsa computations

Analyzing and visualizing results

Working with a mySQL database

Introduction

This manual outlines the steps required to set up and implement highly comparative time-series analysis using the hctsa package, as described in our papers:
1.
B.D. Fulcher and N.S. Jones. hctsa: A computational framework for automated time-series phenotyping using massive feature extraction. Cell Systems 5, 527 (2017).
2.
B.D. Fulcher, M.A. Little, N.S. Jones. Highly comparative time-series analysis: the empirical structure of time series and their methods. J. Roy. Soc. Interface 10, 20130048 (2013).
An updated list of papers related to hctsa, or using hctsa is maintained on the hctsa wiki here.
An overview tutorial on applying hctsa to a 5-class EEG dataset is here, and a recording of the tutorial (final ~hour is a hands-on demo using this dataset) is on YouTube.

List of included code files

Last modified 1yr ago

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